BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B04SP1|AL428493
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1380 1751 0.0
>3x_Contig1380
Length = 6718
Score = 1751 bits (878), Expect = 0.0
Identities = 897/907 (98%), Gaps = 1/907 (0%)
Strand = Plus / Plus
Query: 1 attccctccatccctcctcgcagttttctttccaacccgaaatagatccccattttcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2324 attccctccatccctcctcgcagttttctttccaacccgaaatagatccccattttcccc 2383
Query: 61 tcgatgctctgtttcgagacccatttgatgaagtattatataataacgattcccaatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2384 tcgatgctctgtttcgagacccatttgatgaagtattatataataacgattcccaatttg 2443
Query: 121 gcaaaaaggtaaacataccggatgggaaaaaaaacacatctacatcacatagccatgtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2444 gcaaaaaggtaaacataccggatgggaaaaaaaacacatctacatcacatagccatgtac 2503
Query: 181 cgagaaagtctctacatatgctttgaaacatatggaactgtgagggacgttcttcttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2504 cgagaaagtctctacatatgctttgaaacatatggaactgtgagggacgttcttcttatt 2563
Query: 241 taamatatcttcatcaaaaactacctcgtagcaagggtctttggtttttmagtggctacg 300
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2564 taaaatatcttcatcaaaaactacctcgtagcaagggtctttggtttttaagtggctacg 2623
Query: 301 tttattaaacgtttaggtaccagaatagcagactcagtcgtccaagcatcaccacgaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2624 tttattaaacgtttaggtaccagaatagcagactcagtcgtccaagcatcaccacgaact 2683
Query: 361 cttcagagttggtagacagtagtaggaaagagagtgtgtgttttattctgcgcatttgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2684 cttcagagttggtagacagtagtaggaaagagagtgtgtgttttattctgcgcatttgag 2743
Query: 421 acccggtctttaggcgagactgcacgaagtttacaatcgtggcagtgtggtatattaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2744 acccggtctttaggcgagactgcacgaagtttacaatcgtggcagtgtggtatattaaca 2803
Query: 481 gaagatacacaaggcaattgaagcgaaacgagacaggtataaagcaaacgaaaaactagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2804 gaagatacacaaggcaattgaagcgaaacgagacaggtataaagcaaacgaaaaactagt 2863
Query: 541 tgcattagatgtcctacttcagtacaccgactaaacagtcgaaatctacgtacagtccac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2864 tgcattagatgtcctacttcagtacaccgactaaacagtcgaaatctacgtacagtccac 2923
Query: 601 aatcatgcttgahacaacaagatatgaacagttcttttcagawatcacacaaaccctgct 660
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2924 aatcatgcttgaaacaacaagatatgaacagttcttttcagaaatcacacaaaccctgct 2983
Query: 661 cttcgcaagtgcggttctcactcccagtagaaganagatcaagcgacattgatacaacta 720
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2984 cttcgcaagtgcggttctcactcccagtagaagaaagatcaagcgacattgatacaacta 3043
Query: 721 ttgataatgatgaagaaaaccatcctaatagtcactttggacatgagawawatcctcact 780
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 3044 ttgataatgatgaagaaaaccatcctaatagtcactttggacatgagaaaaatcctcact 3103
Query: 781 tcctagattcagacaaatctcatacaagahtgagttgttcaaggtcagagtttcctagca 840
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 3104 tcctagattcagacaaatctcatacaagaatgagttgttcaaggtcagagtctcctagca 3163
Query: 841 aaattgtgtatccggcatcgttaaacatgcatgaggaaatgcccacgtttgttygattat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3164 aaattgtgtatccggcatcgttaaacatgcatgaggaaatgcccacgtttgtt-gattat 3222
Query: 901 tccaaga 907
|||||||
Sbjct: 3223 tccaaga 3229
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5575
Number of Sequences: 1807
Number of extensions: 5575
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)